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The only thing more frustrating than discovering a backpressure issue is diagnosing it. Trust me—you’re not alone!

There are three classes of backpressure deviations that most HPLC-users face:
fluctuating backpressure, which is generally system related
low backpressure, the most uncommon type of backpressure
● and high backpressure, the most common type of backpressure

Fluctuating Backpressure

A backpressure fluctuation in a repetitive pattern can often be traced to the pump. Usually, an air bubble is the culprit, which means a pump head needs to be purged. The flow will subsequently pulse—typically visible by removing the column, increasing the flow rate, and observing a pattern of eluent pulses that otherwise should be a smooth, streaming flow.

Backpressure fluctuation that is erratic, however, can often be traced to a leak in the system. The injection valve is a common component where a small leak could go unnoticed, as well as the connection to the column if not sufficiently or properly connected with the nut and ferrule.

Under gradient elution, ineffective gradient mixing can also be the source of erratically fluctuating backpressures.

Low Backpressure

Backpressures significantly lower than what are typically observed are a bit unusual and can often be traced to a simple oversight.

Be sure to check:
column dimensions – is your internal diameter or particle size too large?
mobile phase composition – are you using the correct type?
flow rate – is it set too low?

If you’re running a gradient, you could possibly be pumping from the wrong lines with a higher percentage of organic than initially intended.

High Backpressure

Backpressures significantly higher than expected are due to a blockage in the flow path.

If the backpressure is high upon initial installation prior to any injections, find the source of the blockage in the system and purge. If the column is found to be the source, examine the connective tubing and fittings to ensure a proper fit has been applied. Additionally, it is useful to know what solvents were run through the system previously, and ensure that incompatible solvents and buffers were thoroughly flushed out of the system lines.

If the backpressures increase upon successive sample injections, something from the sample is likely fouling the column inlet. For method development cases where the expectations have not been thoroughly characterized, a guard column can be particularly useful to protect the analytical column from fouling through unknowns, such as precipitation or chemical attack.

If the backpressure increases unexpectedly during a routine analysis that has already been thoroughly characterized, examining chromatographic symptoms associated with the increase in backpressure can be a clue as to the likely root cause.

Good luck, and happy analyzing!


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